net.aavalla.utils.general
Class FastaUtils

java.lang.Object
  extended by net.aavalla.utils.general.FastaUtils

public class FastaUtils
extends java.lang.Object

Some utility methods for parsing FASTA files

Author:
Lari Natri

Nested Class Summary
static class FastaUtils.FastaLineType
          Type of a line in a FASTA file
 
Constructor Summary
FastaUtils()
           
 
Method Summary
static FastaUtils.FastaLineType getFastaLineType(java.lang.String fastaLine)
          Returns the type of the given line
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

FastaUtils

public FastaUtils()
Method Detail

getFastaLineType

public static FastaUtils.FastaLineType getFastaLineType(java.lang.String fastaLine)
Returns the type of the given line

Parameters:
fastaLine - one line in a FASTA file
Returns:
type of the line